| Services |
| Inputs |
Minimum Volume/Concentration |
Sample types |
|
Outputs |
| Stranded mRNA Sequencing: 50 million, 75 million, or 100 million reads aligned in pairs |
- ≥800 ng total in 50–300 µL volume, 10–110 ng/µL concentration preferred, 6.5 ng/µL minimum acceptable concentration
- RIN>5.5 required, RIN>7 preferred
| PAXgene preserved whole blood, fresh frozen tissue, and cell pellet also accepted |
CRAM file |
| Total RNA Sequencing: 50, 100, and 200 million reads aligned in pairs |
- ≥500 ng total in 50–300 μL volume, 30 ng/μL
concentration
- Minimum 24 samples/batch
- A260/230>1.3
- RIN>3.5 required
|
PAXGene whole blood, or purified RNA derived from
whole blood or fresh frozen tissue |
CRAM file aligned to human genome assembly (HG38) |
| Transcriptome Capture: 50 million reads aligned in pairs |
-
≥1 µg in 50–300 µL volume, 85–110 ng/µL concentration
-
DV200 scores >30%
|
Purified total RNA that is FFPE derived or low quality; other sample types available for processing (blood, stool, cell pellets) |
STAR genome aligned BAM (HG19 or HG38), STAR transcriptome aligned BAM (HG19 or HG38) |